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Nature Communications· 2020Q1

Improving the accuracy of medical diagnosis with causal machine learning

Jonathan G. Richens, Ciarán M. Lee, Saurabh Johri

Short summary

A new counterfactual machine learning algorithm achieved expert clinical accuracy in diagnosing patients, placing in the top 25% of doctors in a clinical vignette test, significantly outperforming standard associative algorithms (top 48%).

AI-generated from the title and abstract; the full text is not read.

Key points

  • Existing machine learning diagnostic tools are purely associative, leading to potential errors by confusing correlation with causation.
  • The study reformulates medical diagnosis as a counterfactual inference task.
  • A novel counterfactual diagnostic algorithm was developed and tested.
  • The counterfactual algorithm achieved expert clinical accuracy, ranking in the top 25% of doctors on a clinical vignette test.
  • Standard associative algorithms performed less effectively, ranking in the top 48%.

AI-generated from the title and abstract; the full text is not read.

Abstract

Machine learning promises to revolutionize clinical decision making and diagnosis. In medical diagnosis a doctor aims to explain a patient's symptoms by determining the diseases causing them. However, existing machine learning approaches to diagnosis are purely associative, identifying diseases that are strongly correlated with a patients symptoms. We show that this inability to disentangle correlation from causation can result in sub-optimal or dangerous diagnoses. To overcome this, we reformulate diagnosis as a counterfactual inference task and derive counterfactual diagnostic algorithms. We compare our counterfactual algorithms to the standard associative algorithm and 44 doctors using a test set of clinical vignettes. While the associative algorithm achieves an accuracy placing in the top 48% of doctors in our cohort, our counterfactual algorithm places in the top 25% of doctors, achieving expert clinical accuracy. Our results show that causal reasoning is a vital missing ingredient for applying machine learning to medical diagnosis.

The authors' abstract, as published at the source. Nature Communications, 2020 · DOI ↗

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Field: Family Practice

Family PracticeMedicine