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NeuroImage· 2017Q1

Image processing and Quality Control for the first 10,000 brain imaging datasets from UK Biobank

Fidel Alfaro‐Almagro, Mark Jenkinson, Neal K. Bangerter, Jesper Andersson et al.

Short summary

A new automated pipeline for processing and quality control (QC) of UK Biobank brain imaging data has been developed and released, enabling researchers to utilize the first 10,000 released datasets.

AI-generated from the title and abstract; the full text is not read.

Key points

  • UK Biobank is releasing brain imaging data from 100,000 participants across 6 modalities.
  • An automated processing and QC pipeline has been developed for the first 10,000 released datasets.
  • The pipeline aims to convert raw data into useful summary information for researchers.
  • The paper describes the pipeline, acquisition protocol, and quantitative investigations.

AI-generated from the title and abstract; the full text is not read.

Abstract

UK Biobank is a large-scale prospective epidemiological study with all data accessible to researchers worldwide. It is currently in the process of bringing back 100,000 of the original participants for brain, heart and body MRI, carotid ultrasound and low-dose bone/fat x-ray. The brain imaging component covers 6 modalities (T1, T2 FLAIR, susceptibility weighted MRI, Resting fMRI, Task fMRI and Diffusion MRI). Raw and processed data from the first 10,000 imaged subjects has recently been released for general research access. To help convert this data into useful summary information we have developed an automated processing and QC (Quality Control) pipeline that is available for use by other researchers. In this paper we describe the pipeline in detail, following a brief overview of UK Biobank brain imaging and the acquisition protocol. We also describe several quantitative investigations carried out as part of the development of both the imaging protocol and the processing pipeline.

The authors' abstract, as published at the source. NeuroImage, 2017 · DOI ↗

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Field: Radiology, Nuclear Medicine and Imaging

Radiology, Nuclear Medicine and ImagingMedicine