Molecular Biology and Evolution· 2026Q1

IQ-TREE 3: phylogenomic inference software using complex evolutionary models

Thomas K. F. Wong, Nhan Ly-Trong, Huaiyan Ren, Piyumal Demotte et al.

394citations
Q1SCImago
2026year

Short summary

IQ-TREE 3, a major update to the popular phylogenetics software, now infers evolutionary trees using mixture models and quantifies discordance between genomic regions with gene and site concordance factors.

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GeneticsBiochemistry, Genetics and Molecular Biology