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Scientific Reports· 2026Q1

Deep learning quantification of mouse nesting behavior for tracking cognitive decline in models of aging & Alzheimer’s disease

Fritz E. L. Miot, Zion I. Shih, Stephen Salloum, Phoebe P. Chum et al.

Short summary

An AI pipeline called CozyScores, built on ResNet18, accurately quantifies mouse nesting behavior, distinguishing between young/old and wild-type/Alzheimer's model mice. At 4 hours, performance scores significantly differed by age and genotype, with Old AD mice scoring lowest (1.71 ± 0.14) compared to Young WT mice (3.80 ± 0.18).

AI-generated from the title and abstract; the full text is not read.

Key points

  • An AI pipeline (CozyScores) using ResNet18 was developed to quantify mouse nesting behavior.
  • Nesting performance scores differed significantly by age and genotype at 4 hours (P < 0.05).
  • Old AD mice exhibited the lowest nesting scores (1.71 ± 0.14) compared to Young WT mice (3.80 ± 0.18).
  • Nest scores declined in older mice (WT: 4.24, AD: 3.59) versus younger mice (WT: 4.60, AD: 4.33) at 24 hours.
  • Males generally outperformed females in nest construction.

AI-generated from the title and abstract; the full text is not read.

Abstract

Abstract The aging brain and development of Alzheimer’s disease (AD) are characterized by neurological degeneration. Nest-building performance captures deteriorating cognitive and motor functions in rodent models of AD; albeit qualitative while limited in physiological scope. To enhance sampling depth and frequency, we developed an artificial intelligence (AI)-powered image analysis pipeline (“CozyScores”) built on the ResNet18 architecture. In male & female C57BL6/J wild-type (WT) & 3xTg-AD mice (AD) mice [Young, 3–6 mo; WT, n = 28; AD, n = 32) & (Old, 21–26 mo; WT, n = 20; AD, n = 12)], we monitored progressive nest organization using photo acquisition across timepoints (0.5 to 24 h) relative to baseline on a 5-point scoring system. At the 4 h benchmark timepoint, a significant ( P < 0.05) difference in performance scores was detected as a function of age and genotype [Young WT (mean ± SEM, 3.80 ± 0.18) > Young AD (3.16 ± 0.24) > Old WT (3.08 ± 0.32) > Old AD (1.71 ± 0.14)]. At 24 h, maximum performance scores declined in Old (WT: 4.24 ± 0.13; AD: 3.59 ± 0.35) versus Young (WT: 4.60 ± 0.05; AD: 4.33 ± 0.13) groups. Males generally performed better than females throughout groups, particularly during nest construction (2 to 8 h). Overall, CozyScores is an automated, high-resolution analysis of behavioral kinetics in mouse models of aging and AD.

The authors' abstract, as published at the source. Scientific Reports, 2026 · DOI ↗

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Field: Developmental Neuroscience

Developmental NeuroscienceNeuroscience